Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Mir6349-201ENSMUST00000184059 97 ntBASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Gm37292-201ENSMUST00000192062 758 ntBASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc78D3Z5T1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 Mir2861-201ENSMUST00000175539 82 ntBASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc78D3Z5T1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc78D3Z5T1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc78D3Z5T1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc78D3Z5T1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc78D3Z5T1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Tgds-204ENSMUST00000228543 1594 ntBASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Fst-202ENSMUST00000223640 2612 ntBASIC20.01■□□□□ 0.79
Ccdc78D3Z5T1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 Gm29241-201ENSMUST00000189260 1096 ntBASIC20■□□□□ 0.79
Ccdc78D3Z5T1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20■□□□□ 0.79
Ccdc78D3Z5T1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc78D3Z5T1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc78D3Z5T1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Gm12382-201ENSMUST00000122005 922 ntBASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc78D3Z5T1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
Ccdc78D3Z5T1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc78D3Z5T1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc78D3Z5T1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc78D3Z5T1 Mir7071-201ENSMUST00000184847 69 ntBASIC19.97■□□□□ 0.79
Ccdc78D3Z5T1 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.97■□□□□ 0.79
Ccdc78D3Z5T1 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.97■□□□□ 0.79
Ccdc78D3Z5T1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms