Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clrn2B2RVW2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clrn2B2RVW2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clrn2B2RVW2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.74■□□□□ 0.91
Clrn2B2RVW2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clrn2B2RVW2 Gm33142-201ENSMUST00000193913 867 ntBASIC20.74■□□□□ 0.91
Clrn2B2RVW2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clrn2B2RVW2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clrn2B2RVW2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.74■□□□□ 0.91
Clrn2B2RVW2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clrn2B2RVW2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Clrn2B2RVW2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.73■□□□□ 0.91
Clrn2B2RVW2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clrn2B2RVW2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.73■□□□□ 0.91
Clrn2B2RVW2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.73■□□□□ 0.91
Clrn2B2RVW2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clrn2B2RVW2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.73■□□□□ 0.91
Clrn2B2RVW2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.73■□□□□ 0.91
Clrn2B2RVW2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.73■□□□□ 0.91
Clrn2B2RVW2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clrn2B2RVW2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Gm22697-201ENSMUST00000175194 63 ntBASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Clrn2B2RVW2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Gm18101-201ENSMUST00000215769 548 ntBASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn2B2RVW2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.71■□□□□ 0.91
Clrn2B2RVW2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Clrn2B2RVW2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 BC021767-201ENSMUST00000126387 1716 ntBASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clrn2B2RVW2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clrn2B2RVW2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clrn2B2RVW2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.69■□□□□ 0.9
Clrn2B2RVW2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clrn2B2RVW2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.69■□□□□ 0.9
Clrn2B2RVW2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.69■□□□□ 0.9
Clrn2B2RVW2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clrn2B2RVW2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clrn2B2RVW2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clrn2B2RVW2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clrn2B2RVW2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn2B2RVW2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.67■□□□□ 0.9
Clrn2B2RVW2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clrn2B2RVW2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clrn2B2RVW2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clrn2B2RVW2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clrn2B2RVW2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms