Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Gm21559-201ENSMUST00000220638 855 ntBASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Gm8587-201ENSMUST00000076538 843 ntBASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a6B1AVK5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a6B1AVK5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a6B1AVK5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a6B1AVK5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a6B1AVK5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Gm27704-201ENSMUST00000185094 107 ntBASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Gm37025-201ENSMUST00000195159 829 ntBASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a6B1AVK5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.52■□□□□ 0.55
Col4a6B1AVK5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a6B1AVK5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a6B1AVK5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a6B1AVK5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a6B1AVK5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col4a6B1AVK5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a6B1AVK5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a6B1AVK5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a6B1AVK5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a6B1AVK5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col4a6B1AVK5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.5■□□□□ 0.55
Col4a6B1AVK5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Gm17808-201ENSMUST00000200859 894 ntBASIC18.5■□□□□ 0.55
Col4a6B1AVK5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Gm10566-201ENSMUST00000086739 996 ntBASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a6B1AVK5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Gm17807-201ENSMUST00000186869 298 ntBASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a6B1AVK5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a6B1AVK5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Gm27357-201ENSMUST00000183754 135 ntBASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Gm18669-201ENSMUST00000216049 778 ntBASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a6B1AVK5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms