Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Col6a4A2AX52 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Col6a4A2AX52 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Col6a4A2AX52 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Col6a4A2AX52 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a4A2AX52 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col6a4A2AX52 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.03■□□□□ -0
Col6a4A2AX52 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.03■□□□□ -0
Col6a4A2AX52 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a4A2AX52 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Col6a4A2AX52 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a4A2AX52 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a4A2AX52 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a4A2AX52 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a4A2AX52 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.02■□□□□ -0
Col6a4A2AX52 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.02■□□□□ -0
Col6a4A2AX52 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.02■□□□□ -0
Col6a4A2AX52 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Col6a4A2AX52 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a4A2AX52 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a4A2AX52 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Col6a4A2AX52 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a4A2AX52 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.02□□□□□ -0.01
Col6a4A2AX52 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.02□□□□□ -0.01
Col6a4A2AX52 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Col6a4A2AX52 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Col6a4A2AX52 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a4A2AX52 Gm9013-201ENSMUST00000132939 882 ntBASIC15.01□□□□□ -0.01
Col6a4A2AX52 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a4A2AX52 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.01□□□□□ -0.01
Col6a4A2AX52 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Col6a4A2AX52 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col6a4A2AX52 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15□□□□□ -0.01
Col6a4A2AX52 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15□□□□□ -0.01
Col6a4A2AX52 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col6a4A2AX52 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Gm38342-201ENSMUST00000195710 2980 ntBASIC15□□□□□ -0.01
Col6a4A2AX52 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15□□□□□ -0.01
Col6a4A2AX52 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Gm5867-201ENSMUST00000063197 592 ntBASIC15□□□□□ -0.01
Col6a4A2AX52 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15□□□□□ -0.01
Col6a4A2AX52 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col6a4A2AX52 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col6a4A2AX52 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a4A2AX52 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a4A2AX52 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms