Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1aA2APX8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1aA2APX8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1aA2APX8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1aA2APX8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1aA2APX8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1aA2APX8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1aA2APX8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1aA2APX8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1aA2APX8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn1aA2APX8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn1aA2APX8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Gm5417-201ENSMUST00000079706 384 ntBASIC18.79■□□□□ 0.6
Scn1aA2APX8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn1aA2APX8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Gm43799-201ENSMUST00000201845 579 ntBASIC18.78■□□□□ 0.6
Scn1aA2APX8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1aA2APX8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scn1aA2APX8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1aA2APX8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn1aA2APX8 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.77■□□□□ 0.59
Scn1aA2APX8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Scn1aA2APX8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.76■□□□□ 0.59
Scn1aA2APX8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Gm12085-201ENSMUST00000119263 940 ntBASIC18.76■□□□□ 0.59
Scn1aA2APX8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.76■□□□□ 0.59
Scn1aA2APX8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.76■□□□□ 0.59
Scn1aA2APX8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1aA2APX8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Scn1aA2APX8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1aA2APX8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms