Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Reep4-203ENSMUST00000226563 1444 ntBASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-1A0N8R0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-1A0N8R0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-1A0N8R0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Idnk-204ENSMUST00000226010 1898 ntBASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms