Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Pcdhgb8A0A140LI48 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhgb8A0A140LI48 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhgb8A0A140LI48 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Gm7290-201ENSMUST00000104990 617 ntBASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Gm12918-201ENSMUST00000120234 636 ntBASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Gm15710-201ENSMUST00000121821 636 ntBASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Gm5075-201ENSMUST00000196916 622 ntBASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.13■□□□□ 0.17
Pcdhgb8A0A140LI48 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgb8A0A140LI48 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Gm7860-201ENSMUST00000121190 879 ntBASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgb8A0A140LI48 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Mir5133-201ENSMUST00000174955 77 ntBASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhgb8A0A140LI48 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms