Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trbv29A0A0G2LB96 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv29A0A0G2LB96 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv29A0A0G2LB96 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trbv29A0A0G2LB96 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trbv29A0A0G2LB96 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv29A0A0G2LB96 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv29A0A0G2LB96 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Trbv29A0A0G2LB96 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv29A0A0G2LB96 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv29A0A0G2LB96 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms