Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Trmt13-210ENSMUST00000198454 880 ntBASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Mir7071-201ENSMUST00000184847 69 ntBASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm37856-201ENSMUST00000191634 999 ntBASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-4A0A0G2JG01 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms