Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm18025-201ENSMUST00000221733 862 ntBASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm15378-201ENSMUST00000121894 207 ntBASIC15.77■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.77■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Gm8520-201ENSMUST00000186517 868 ntBASIC15.77■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv12-1A0A0B4J1H0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.77■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.76■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Mir8112-201ENSMUST00000184382 131 ntBASIC15.76■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm13401-201ENSMUST00000117074 291 ntBASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm13168-201ENSMUST00000121771 632 ntBASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm42545-201ENSMUST00000202755 922 ntBASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms