Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gm43060-201ENSMUST00000200621 289 ntBASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Tgds-204ENSMUST00000228543 1594 ntBASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.67□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.66□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv4-78A0A0A6YYE5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms