Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Trmt13-210ENSMUST00000198454 880 ntBASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6n-7A0A075B6A6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6n-7A0A075B6A6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Gm10653-202ENSMUST00000139570 835 ntBASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-7A0A075B6A6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-7A0A075B6A6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms