Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Trav8n-2A0A075B633 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav8n-2A0A075B633 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Gm14859-201ENSMUST00000117752 357 ntBASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Gm22697-201ENSMUST00000175194 63 ntBASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav8n-2A0A075B633 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8n-2A0A075B633 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8n-2A0A075B633 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Gm10418-201ENSMUST00000100943 576 ntBASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8n-2A0A075B633 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Gm16061-201ENSMUST00000122167 857 ntBASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Gm25016-201ENSMUST00000158399 131 ntBASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms