Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.51□□□□□ -1.53
Lima1Q9ERG0 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.51□□□□□ -1.53
Lima1Q9ERG0 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.51□□□□□ -1.53
Lima1Q9ERG0 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm12985-201ENSMUST00000118376 183 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm14065-201ENSMUST00000120848 585 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm14679-201ENSMUST00000121536 722 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm26170-201ENSMUST00000158419 148 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Vis1-201ENSMUST00000183957 201 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm19087-201ENSMUST00000191430 946 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm38122-201ENSMUST00000192679 885 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm38360-201ENSMUST00000195130 454 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm9317-201ENSMUST00000197055 862 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm43105-201ENSMUST00000202987 459 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm7887-201ENSMUST00000056948 537 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm23737-201ENSMUST00000082547 159 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm23502-201ENSMUST00000083902 145 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Lima1Q9ERG0 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm23739-201ENSMUST00000102295 108 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm24709-201ENSMUST00000104123 132 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm25917-201ENSMUST00000104267 130 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm14529-201ENSMUST00000117894 406 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm23896-201ENSMUST00000158109 130 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm6872-201ENSMUST00000165001 700 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm24300-201ENSMUST00000177809 109 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm24017-201ENSMUST00000178726 109 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm23952-201ENSMUST00000179380 109 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm1972-201ENSMUST00000181606 964 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm28149-201ENSMUST00000187102 378 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm28768-201ENSMUST00000189034 378 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm18467-201ENSMUST00000208805 434 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms