Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm20770-201ENSMUST00000193474 694 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm43655-201ENSMUST00000197367 222 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm9480-201ENSMUST00000198038 616 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm42961-201ENSMUST00000202023 181 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm6702-201ENSMUST00000208496 471 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Cdc40Q9DC48 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.34□□□□□ -1.56
Cdc40Q9DC48 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Cdc40Q9DC48 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.56
Cdc40Q9DC48 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cdc40Q9DC48 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Cdc40Q9DC48 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.34□□□□□ -1.56
Cdc40Q9DC48 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm14756-201ENSMUST00000116395 240 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm13451-201ENSMUST00000117649 592 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm12293-201ENSMUST00000121898 590 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm25152-201ENSMUST00000157117 114 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm22492-201ENSMUST00000157192 297 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm7745-201ENSMUST00000182235 973 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm27762-201ENSMUST00000183417 109 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm20561-201ENSMUST00000188131 292 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm18444-201ENSMUST00000191239 629 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm43779-201ENSMUST00000196691 829 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm45733-201ENSMUST00000212988 437 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm6056-201ENSMUST00000221253 488 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm23456-201ENSMUST00000083335 137 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.33□□□□□ -1.56
Cdc40Q9DC48 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms