Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm7867-201ENSMUST00000189856 546 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm45196-201ENSMUST00000206751 825 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm7780-201ENSMUST00000214787 406 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 CT030662.2-201ENSMUST00000226942 805 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm21731-201ENSMUST00000079524 489 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Mir16-2-201ENSMUST00000083672 95 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm38104-201ENSMUST00000195121 1895 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm22256-201ENSMUST00000102291 107 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm11501-201ENSMUST00000118039 581 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm13579-201ENSMUST00000118519 517 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm14442-201ENSMUST00000119690 1736 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm13815-201ENSMUST00000119963 412 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm11545-201ENSMUST00000146507 375 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Mup-ps4-201ENSMUST00000151005 539 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm24422-201ENSMUST00000157800 119 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm26335-201ENSMUST00000178449 107 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Mir6951-201ENSMUST00000183910 75 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Mir6769b-201ENSMUST00000184793 60 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm28997-201ENSMUST00000188759 429 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm28846-201ENSMUST00000189161 368 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm37661-201ENSMUST00000191863 1550 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm37946-201ENSMUST00000192064 347 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Ighv1-17-201ENSMUST00000194435 350 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm2767-201ENSMUST00000209582 473 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm8189-203ENSMUST00000211159 1225 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 AC131068.1-201ENSMUST00000226891 482 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Mir106b-201ENSMUST00000083580 82 ntBASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim11Q99PQ2 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms