Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm23440-201ENSMUST00000104299 130 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm11270-201ENSMUST00000117685 471 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm15335-201ENSMUST00000122442 411 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm9006-201ENSMUST00000165520 841 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm17366-201ENSMUST00000167629 187 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm38040-201ENSMUST00000193505 225 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm17952-201ENSMUST00000193914 747 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm43946-201ENSMUST00000204058 886 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm9278-201ENSMUST00000205508 553 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm7802-201ENSMUST00000216464 262 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm18413-201ENSMUST00000221573 655 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 CT485612.3-201ENSMUST00000222179 408 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Vps39Q8R5L3 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm13835-201ENSMUST00000118459 685 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm12890-201ENSMUST00000120885 373 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm25387-201ENSMUST00000157813 132 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm24179-201ENSMUST00000158925 127 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm15257-201ENSMUST00000177680 883 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm15252-201ENSMUST00000177750 883 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm15256-201ENSMUST00000177793 883 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm15260-201ENSMUST00000179402 883 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm4322-201ENSMUST00000191094 336 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm37191-201ENSMUST00000193346 388 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm37177-201ENSMUST00000193768 417 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm2602-201ENSMUST00000202112 571 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm31166-201ENSMUST00000209326 288 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm7990-201ENSMUST00000212126 593 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 AC129323.1-201ENSMUST00000216733 470 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm2099-201ENSMUST00000220979 412 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm32526-201ENSMUST00000221878 981 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 AC131100.2-201ENSMUST00000227701 998 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps39Q8R5L3 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms