Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm30738-201ENSMUST00000221346 502 ntBASIC5.95□□□□□ -1.46
Clrn1Q8K445 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.95□□□□□ -1.46
Clrn1Q8K445 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.95□□□□□ -1.46
Clrn1Q8K445 AC160962.2-201ENSMUST00000224761 632 ntBASIC5.95□□□□□ -1.46
Clrn1Q8K445 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.95□□□□□ -1.46
Clrn1Q8K445 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.95□□□□□ -1.46
Clrn1Q8K445 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.95□□□□□ -1.46
Clrn1Q8K445 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Clrn1Q8K445 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Clrn1Q8K445 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.95□□□□□ -1.46
Clrn1Q8K445 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Clrn1Q8K445 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Clrn1Q8K445 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Clrn1Q8K445 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.95□□□□□ -1.46
Clrn1Q8K445 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Clrn1Q8K445 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.95□□□□□ -1.46
Clrn1Q8K445 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Clrn1Q8K445 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Clrn1Q8K445 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.95□□□□□ -1.46
Clrn1Q8K445 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Clrn1Q8K445 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Clrn1Q8K445 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm12040-201ENSMUST00000118357 537 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm6806-201ENSMUST00000120092 1006 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm11472-201ENSMUST00000121305 556 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm12369-201ENSMUST00000121343 942 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm2619-202ENSMUST00000166777 651 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm5473-201ENSMUST00000179326 642 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Mir7212-201ENSMUST00000184098 61 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm36378-201ENSMUST00000201709 388 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm43979-201ENSMUST00000203179 475 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm8748-201ENSMUST00000211125 587 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm9535-201ENSMUST00000218499 768 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm18628-201ENSMUST00000220584 475 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm4057-201ENSMUST00000221407 368 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 AC154747.1-201ENSMUST00000225265 239 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm26072-201ENSMUST00000083135 107 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm38276-201ENSMUST00000192446 1343 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.94□□□□□ -1.46
Clrn1Q8K445 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Clrn1Q8K445 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
Clrn1Q8K445 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Clrn1Q8K445 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.93□□□□□ -1.46
Clrn1Q8K445 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Clrn1Q8K445 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.93□□□□□ -1.46
Clrn1Q8K445 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Clrn1Q8K445 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Clrn1Q8K445 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Clrn1Q8K445 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Clrn1Q8K445 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Clrn1Q8K445 Gm12393-201ENSMUST00000117084 848 ntBASIC5.93□□□□□ -1.46
Clrn1Q8K445 Gm8250-201ENSMUST00000117398 774 ntBASIC5.93□□□□□ -1.46
Clrn1Q8K445 Gm13400-201ENSMUST00000117436 380 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms