Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm14912-201ENSMUST00000120166 1773 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm12344-201ENSMUST00000117087 329 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm10241-201ENSMUST00000117664 286 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm8662-201ENSMUST00000118644 574 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm11198-201ENSMUST00000119771 974 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm25970-201ENSMUST00000157165 86 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm24011-201ENSMUST00000157732 268 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm23501-201ENSMUST00000157744 256 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm24875-201ENSMUST00000158888 104 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm43558-201ENSMUST00000200155 210 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm34583-203ENSMUST00000202586 454 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm46234-201ENSMUST00000218702 259 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 AC156576.2-202ENSMUST00000222525 411 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdhb7Q8CDY9 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm22707-201ENSMUST00000103834 110 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm15010-201ENSMUST00000117153 407 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm15576-201ENSMUST00000117806 583 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm14172-201ENSMUST00000118255 644 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm11558-201ENSMUST00000118454 459 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm11352-201ENSMUST00000119264 517 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm12880-201ENSMUST00000120652 494 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm12755-201ENSMUST00000122297 282 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm10086-201ENSMUST00000136334 354 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm4997-201ENSMUST00000154056 360 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm25163-201ENSMUST00000158905 104 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm8338-201ENSMUST00000163928 363 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm22132-201ENSMUST00000175316 100 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Mir3072-201ENSMUST00000175610 83 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm20111-201ENSMUST00000184830 319 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Mir6403-201ENSMUST00000185007 129 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm10193-201ENSMUST00000188288 231 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm29435-201ENSMUST00000191310 689 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC7.28□□□□□ -1.24
Pcdhb7Q8CDY9 Gm43226-201ENSMUST00000202438 259 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms