Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Atg4aQ8C9S8 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm8582-201ENSMUST00000164061 789 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm38181-201ENSMUST00000181357 720 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm28188-201ENSMUST00000190483 236 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm37308-201ENSMUST00000194684 100 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm44134-202ENSMUST00000204777 545 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm18537-201ENSMUST00000205709 989 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm44571-201ENSMUST00000208092 533 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm45734-201ENSMUST00000211916 411 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm6477-201ENSMUST00000217098 764 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Atg4aQ8C9S8 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.33
Atg4aQ8C9S8 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.71□□□□□ -1.33
Atg4aQ8C9S8 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Atg4aQ8C9S8 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Atg4aQ8C9S8 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
Atg4aQ8C9S8 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.71□□□□□ -1.33
Atg4aQ8C9S8 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.33
Atg4aQ8C9S8 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm24265-201ENSMUST00000101833 141 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm13681-201ENSMUST00000117925 210 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm25152-201ENSMUST00000157117 114 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm25489-201ENSMUST00000158727 141 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm22122-201ENSMUST00000175147 200 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm24407-201ENSMUST00000177864 141 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Clec2j-202ENSMUST00000203658 606 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Atg4aQ8C9S8 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms