Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm16200-201ENSMUST00000120385 331 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm24940-201ENSMUST00000158326 108 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm22261-201ENSMUST00000158691 324 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Mir6539-201ENSMUST00000183732 110 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm7838-201ENSMUST00000203221 1189 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm44673-201ENSMUST00000205692 996 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 AC183268.2-201ENSMUST00000214513 446 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 AC164315.1-201ENSMUST00000226452 708 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 AC102291.1-201ENSMUST00000227164 529 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm37051-201ENSMUST00000194535 2943 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm8853-201ENSMUST00000198366 1344 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm42436-201ENSMUST00000198804 3656 ntBASIC7.89□□□□□ -1.15
Usp47Q8BY87 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm44667-201ENSMUST00000207632 3337 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Robo2-210ENSMUST00000226478 8059 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm11679-201ENSMUST00000121830 779 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm22895-201ENSMUST00000157508 308 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm6543-201ENSMUST00000197353 808 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm42461-201ENSMUST00000198627 1150 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm43554-201ENSMUST00000199987 186 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm45777-201ENSMUST00000213009 301 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm7768-201ENSMUST00000222988 597 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 AC137871.4-201ENSMUST00000226323 3901 ntBASIC7.88□□□□□ -1.15
Usp47Q8BY87 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Usp47Q8BY87 Gm43485-201ENSMUST00000199292 1710 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm15428-201ENSMUST00000121352 333 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm11804-201ENSMUST00000121663 468 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm15812-201ENSMUST00000162331 748 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm22411-201ENSMUST00000175462 126 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm22002-201ENSMUST00000175622 125 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm21654-201ENSMUST00000188086 691 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm38185-201ENSMUST00000193195 694 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm43629-201ENSMUST00000201782 704 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm9685-201ENSMUST00000211275 538 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 CT030195.1-201ENSMUST00000223887 378 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm43175-201ENSMUST00000198450 3810 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms