Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm21191-201ENSMUST00000186484 930 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm28188-201ENSMUST00000190483 236 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm29503-201ENSMUST00000191044 930 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm37727-201ENSMUST00000191637 819 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm36994-201ENSMUST00000192941 492 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm44392-201ENSMUST00000196758 115 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm7733-201ENSMUST00000199038 919 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm8930-201ENSMUST00000201693 768 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm42646-201ENSMUST00000202233 914 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm44412-201ENSMUST00000203018 294 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm44656-201ENSMUST00000208428 490 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm44954-201ENSMUST00000208513 227 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 AC157017.2-201ENSMUST00000218354 777 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 AC109214.2-201ENSMUST00000220089 358 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 AC137950.3-201ENSMUST00000228250 246 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm15425-201ENSMUST00000119013 2711 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm37913-201ENSMUST00000192925 2544 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 AC144733.2-201ENSMUST00000222552 2292 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm42940-201ENSMUST00000200361 2362 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 CT009480.2-201ENSMUST00000225152 3369 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm12096-201ENSMUST00000121149 829 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm3025-201ENSMUST00000163454 489 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm17142-201ENSMUST00000164933 645 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm3077-201ENSMUST00000165903 627 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm2878-201ENSMUST00000170173 486 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm19791-201ENSMUST00000180398 859 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm29159-201ENSMUST00000187969 379 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm38333-201ENSMUST00000193608 604 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm8023-201ENSMUST00000195298 903 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm42522-201ENSMUST00000196071 255 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm43516-201ENSMUST00000196891 322 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm8703-201ENSMUST00000203793 730 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm8039-201ENSMUST00000204758 712 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm4548-201ENSMUST00000208487 509 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm33601-201ENSMUST00000210001 961 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm18705-201ENSMUST00000215985 913 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 AC129219.1-201ENSMUST00000224336 448 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 AC154583.1-201ENSMUST00000224788 655 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 AC154806.5-205ENSMUST00000228828 411 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm24035-201ENSMUST00000082867 107 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm17165-201ENSMUST00000096155 493 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm45562-201ENSMUST00000210015 1537 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Gm38224-201ENSMUST00000191648 2100 ntBASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp40Q8BWR4 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms