Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28604-201ENSMUST00000186629 484 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28566-201ENSMUST00000186714 484 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28194-201ENSMUST00000187412 484 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28886-202ENSMUST00000187889 484 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28554-202ENSMUST00000189175 484 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29213-202ENSMUST00000189703 484 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28851-202ENSMUST00000189757 484 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28461-201ENSMUST00000190023 484 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm45405-201ENSMUST00000211544 609 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm10709-201ENSMUST00000213318 480 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm46192-201ENSMUST00000217894 326 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Mir188-201ENSMUST00000083464 68 ntBASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc88cQ6VGS5 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Gm11507-201ENSMUST00000156462 412 ntBASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Gm2914-201ENSMUST00000186120 328 ntBASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Gm43629-201ENSMUST00000201782 704 ntBASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 AC158525.1-201ENSMUST00000223806 576 ntBASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.15□□□□□ -1.43
Ccdc88cQ6VGS5 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc88cQ6VGS5 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms