Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm12520-201ENSMUST00000117493 316 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm13357-201ENSMUST00000120528 537 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm15111-201ENSMUST00000122142 878 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm8121-201ENSMUST00000153583 499 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm24719-201ENSMUST00000157520 110 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm28843-201ENSMUST00000189198 678 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm29546-201ENSMUST00000191171 678 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm5694-201ENSMUST00000195648 641 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm43624-201ENSMUST00000197368 180 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 AC153800.1-201ENSMUST00000219212 365 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm6757-201ENSMUST00000189810 1706 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm37304-201ENSMUST00000193833 2886 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm10773-201ENSMUST00000218071 3935 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm43343-201ENSMUST00000202454 1926 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm11617-201ENSMUST00000119609 639 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm6058-201ENSMUST00000154261 399 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Snora47-201ENSMUST00000157483 138 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Mir3062-201ENSMUST00000174986 105 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm17048-201ENSMUST00000179266 847 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm44360-201ENSMUST00000200081 82 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm8911-201ENSMUST00000213986 652 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm4042-201ENSMUST00000216946 637 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm46364-201ENSMUST00000218548 319 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 AC140209.1-204ENSMUST00000226736 739 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm7337-202ENSMUST00000181439 2655 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 CT025619.3-201ENSMUST00000216299 3267 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm37403-201ENSMUST00000193775 3521 ntBASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim41Q5NCC3 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm44130-201ENSMUST00000205157 3004 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm16511-201ENSMUST00000120019 564 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm14589-201ENSMUST00000121640 727 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm11879-201ENSMUST00000121885 702 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm23885-201ENSMUST00000122682 294 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Ear-ps3-201ENSMUST00000168308 445 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm25942-201ENSMUST00000180080 110 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm37586-201ENSMUST00000193654 204 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm43856-201ENSMUST00000197004 369 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm42580-201ENSMUST00000197223 753 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm3148-201ENSMUST00000203594 612 ntBASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim41Q5NCC3 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms