Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 AW046200-203ENSMUST00000211787 2479 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm11699-201ENSMUST00000119016 401 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm22916-201ENSMUST00000157616 119 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm25459-201ENSMUST00000157953 114 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm23995-201ENSMUST00000158060 129 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm8582-201ENSMUST00000164061 789 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm3650-201ENSMUST00000180600 747 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm8419-201ENSMUST00000189886 412 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm19124-201ENSMUST00000191041 832 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm4742-201ENSMUST00000200261 771 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm46223-201ENSMUST00000215196 675 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trafd1Q3UDK1 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm20486-201ENSMUST00000101544 128 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm26067-201ENSMUST00000103789 110 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Mir466j-201ENSMUST00000116876 122 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm25291-201ENSMUST00000122795 144 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm23050-201ENSMUST00000158775 165 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Mir3097-201ENSMUST00000175356 67 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm26057-201ENSMUST00000178099 165 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm2058-201ENSMUST00000178791 560 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm6520-201ENSMUST00000200636 410 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm43945-201ENSMUST00000203595 754 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm19921-201ENSMUST00000210505 703 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Gm45405-201ENSMUST00000211544 609 ntBASIC5.61□□□□□ -1.51
Trafd1Q3UDK1 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms