Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm37407-201ENSMUST00000194793 1316 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm11845-201ENSMUST00000117886 327 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm11972-201ENSMUST00000118514 389 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm13720-201ENSMUST00000120741 196 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
Ebf1Q07802 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm24198-201ENSMUST00000157812 108 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm18560-201ENSMUST00000173463 1123 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Mir7653-201ENSMUST00000184358 61 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm43392-201ENSMUST00000196560 434 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm43659-201ENSMUST00000200894 628 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm18215-201ENSMUST00000204429 798 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm18805-201ENSMUST00000206872 655 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm9373-201ENSMUST00000208724 599 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm18467-201ENSMUST00000208805 434 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm45658-201ENSMUST00000209197 580 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm3266-201ENSMUST00000217832 591 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm9535-201ENSMUST00000218499 768 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.54□□□□□ -1.36
Ebf1Q07802 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ebf1Q07802 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ebf1Q07802 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ebf1Q07802 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ebf1Q07802 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.53□□□□□ -1.36
Ebf1Q07802 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ebf1Q07802 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.53□□□□□ -1.36
Ebf1Q07802 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Ebf1Q07802 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ebf1Q07802 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Ebf1Q07802 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ebf1Q07802 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm5943-201ENSMUST00000119458 459 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm14898-201ENSMUST00000120202 645 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.53□□□□□ -1.36
Ebf1Q07802 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm25037-201ENSMUST00000175418 110 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Mir7020-201ENSMUST00000183787 70 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm6693-201ENSMUST00000189583 813 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm37884-201ENSMUST00000191857 818 ntBASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC6.53□□□□□ -1.36
Ebf1Q07802 Gm44265-201ENSMUST00000203631 465 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms