Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Amy2b-201ENSMUST00000120184 1577 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Rnu11-201ENSMUST00000104135 134 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm15000-201ENSMUST00000118275 1243 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm12565-201ENSMUST00000119004 649 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm12135-201ENSMUST00000119170 466 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm12368-201ENSMUST00000122251 434 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.69□□□□□ -1.5
Col8a1Q00780 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Mup-ps4-201ENSMUST00000151005 539 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm25363-201ENSMUST00000158850 245 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Mir5101-201ENSMUST00000175181 83 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm38181-201ENSMUST00000181357 720 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm18727-201ENSMUST00000185981 553 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm29545-201ENSMUST00000188878 694 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm18426-201ENSMUST00000191874 973 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm37550-201ENSMUST00000193230 463 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm19035-202ENSMUST00000194575 959 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm38109-201ENSMUST00000195386 181 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm43350-201ENSMUST00000196382 711 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm43743-202ENSMUST00000198353 491 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm42824-201ENSMUST00000199361 247 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 AC145736.1-201ENSMUST00000214661 479 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm46203-201ENSMUST00000218130 478 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm24707-201ENSMUST00000082812 107 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm45174-201ENSMUST00000208884 3065 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC5.69□□□□□ -1.5
Col8a1Q00780 AC129308.1-201ENSMUST00000223800 2309 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 AC161884.1-201ENSMUST00000225436 2174 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm21051-201ENSMUST00000221757 1688 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 Gm42885-201ENSMUST00000200763 4214 ntBASIC5.69□□□□□ -1.5
Col8a1Q00780 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col8a1Q00780 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col8a1Q00780 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm37169-201ENSMUST00000195599 4161 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm44185-201ENSMUST00000204539 3307 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm44021-201ENSMUST00000203055 3516 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col8a1Q00780 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm14985-201ENSMUST00000118693 786 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm16179-201ENSMUST00000120685 373 ntBASIC5.68□□□□□ -1.5
Col8a1Q00780 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms