Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 AC131117.2-202ENSMUST00000224539 547 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 AC139197.1-201ENSMUST00000228332 813 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ufd1P70362 Gm42685-201ENSMUST00000200378 2390 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.8□□□□□ -1.64
Ufd1P70362 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ufd1P70362 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ufd1P70362 Gm43359-201ENSMUST00000197944 2200 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.8□□□□□ -1.64
Ufd1P70362 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm14930-201ENSMUST00000118864 652 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm10157-201ENSMUST00000139408 343 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm22916-201ENSMUST00000157616 119 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Gm23069-201ENSMUST00000158240 311 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ufd1P70362 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ufd1P70362 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ufd1P70362 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ufd1P70362 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm9556-201ENSMUST00000182938 940 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Gm38068-201ENSMUST00000192546 540 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm42666-201ENSMUST00000201954 152 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm8523-201ENSMUST00000211386 552 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 AC133598.3-204ENSMUST00000224260 767 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 AC133598.4-201ENSMUST00000224577 454 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm9985-201ENSMUST00000044101 510 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.79□□□□□ -1.64
Ufd1P70362 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ufd1P70362 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ufd1P70362 Gm16270-201ENSMUST00000160327 3238 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ufd1P70362 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ufd1P70362 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ufd1P70362 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ufd1P70362 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Ufd1P70362 Gm23979-201ENSMUST00000104071 128 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ufd1P70362 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ufd1P70362 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ufd1P70362 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ufd1P70362 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ufd1P70362 Gm15967-201ENSMUST00000120027 1116 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 Gm14679-201ENSMUST00000121536 722 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 Gm12396-201ENSMUST00000121600 306 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 Gm12732-201ENSMUST00000121688 180 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 Gm13531-201ENSMUST00000121893 543 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.78□□□□□ -1.64
Ufd1P70362 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC4.78□□□□□ -1.64
Ufd1P70362 Gm21999-201ENSMUST00000165985 387 ntBASIC4.78□□□□□ -1.64
Ufd1P70362 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC4.78□□□□□ -1.64
Ufd1P70362 Gm25617-201ENSMUST00000179548 133 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms