Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Cux1P53564 Gm17223-201ENSMUST00000171413 481 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Gm9457-201ENSMUST00000180176 372 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Gm17766-201ENSMUST00000209223 442 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC8.59□□□□□ -1.03
Cux1P53564 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC8.59□□□□□ -1.03
Cux1P53564 AC152979.3-201ENSMUST00000217720 479 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cux1P53564 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC8.59□□□□□ -1.03
Cux1P53564 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Cux1P53564 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cux1P53564 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC8.59□□□□□ -1.03
Cux1P53564 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cux1P53564 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Cux1P53564 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
Cux1P53564 AC107742.1-201ENSMUST00000227769 1390 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.59□□□□□ -1.03
Cux1P53564 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cux1P53564 Gm44660-201ENSMUST00000207134 2465 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Cux1P53564 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cux1P53564 Gm24350-201ENSMUST00000104163 133 ntBASIC8.59□□□□□ -1.03
Cux1P53564 H3f3c-201ENSMUST00000119459 411 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Ighv5-21-201ENSMUST00000191935 295 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cux1P53564 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Gm43524-201ENSMUST00000197278 298 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
Cux1P53564 Gm9038-201ENSMUST00000203400 604 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Gm3148-201ENSMUST00000203594 612 ntBASIC8.59□□□□□ -1.03
Cux1P53564 AC183268.2-201ENSMUST00000214513 446 ntBASIC8.59□□□□□ -1.03
Cux1P53564 AC153153.2-201ENSMUST00000223572 411 ntBASIC8.59□□□□□ -1.03
Cux1P53564 AC165953.1-201ENSMUST00000226386 357 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Gm23686-201ENSMUST00000083241 164 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Gm22741-201ENSMUST00000083438 165 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Mir30b-201ENSMUST00000083542 96 ntBASIC8.59□□□□□ -1.03
Cux1P53564 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Cux1P53564 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Cux1P53564 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Cux1P53564 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.59□□□□□ -1.04
Cux1P53564 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC8.58□□□□□ -1.04
Cux1P53564 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cux1P53564 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Cux1P53564 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cux1P53564 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC8.58□□□□□ -1.04
Cux1P53564 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC8.58□□□□□ -1.04
Cux1P53564 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cux1P53564 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Cux1P53564 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cux1P53564 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Cux1P53564 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cux1P53564 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC8.58□□□□□ -1.04
Cux1P53564 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cux1P53564 Gm11227-201ENSMUST00000119774 471 ntBASIC8.58□□□□□ -1.04
Cux1P53564 Gm26970-201ENSMUST00000182990 964 ntBASIC8.58□□□□□ -1.04
Cux1P53564 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cux1P53564 Gm37152-201ENSMUST00000193369 1175 ntBASIC8.58□□□□□ -1.04
Cux1P53564 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC8.58□□□□□ -1.04
Cux1P53564 Gm44281-201ENSMUST00000203090 166 ntBASIC8.58□□□□□ -1.04
Cux1P53564 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC8.58□□□□□ -1.04
Cux1P53564 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC8.58□□□□□ -1.04
Cux1P53564 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Cux1P53564 AC154576.2-203ENSMUST00000224736 253 ntBASIC8.58□□□□□ -1.04
Cux1P53564 Gm42686-201ENSMUST00000199172 4108 ntBASIC8.58□□□□□ -1.04
Cux1P53564 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cux1P53564 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC8.58□□□□□ -1.04
Cux1P53564 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cux1P53564 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Cux1P53564 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC8.57□□□□□ -1.04
Cux1P53564 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cux1P53564 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cux1P53564 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC8.57□□□□□ -1.04
Cux1P53564 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Cux1P53564 Gm11912-201ENSMUST00000117235 264 ntBASIC8.57□□□□□ -1.04
Cux1P53564 Gm11270-201ENSMUST00000117685 471 ntBASIC8.57□□□□□ -1.04
Cux1P53564 Gm6872-201ENSMUST00000165001 700 ntBASIC8.57□□□□□ -1.04
Cux1P53564 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC8.57□□□□□ -1.04
Cux1P53564 Gm38040-201ENSMUST00000193505 225 ntBASIC8.57□□□□□ -1.04
Cux1P53564 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC8.57□□□□□ -1.04
Cux1P53564 AC152169.2-201ENSMUST00000224558 613 ntBASIC8.57□□□□□ -1.04
Cux1P53564 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Cux1P53564 Gm42600-201ENSMUST00000202081 3588 ntBASIC8.57□□□□□ -1.04
Cux1P53564 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Cux1P53564 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Gm20300-201ENSMUST00000214634 3440 ntBASIC8.57□□□□□ -1.04
Cux1P53564 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cux1P53564 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Cux1P53564 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms