Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Gm3785-201ENSMUST00000221000 202 ntBASIC6.41□□□□□ -1.38
Shmt1P50431 Gm5087-204ENSMUST00000225820 645 ntBASIC6.41□□□□□ -1.38
Shmt1P50431 AC147628.1-201ENSMUST00000228193 688 ntBASIC6.41□□□□□ -1.38
Shmt1P50431 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Shmt1P50431 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Shmt1P50431 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Shmt1P50431 Mir298-201ENSMUST00000083476 82 ntBASIC6.41□□□□□ -1.38
Shmt1P50431 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Shmt1P50431 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.41□□□□□ -1.38
Shmt1P50431 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Gm7648-201ENSMUST00000173036 1658 ntBASIC6.41□□□□□ -1.38
Shmt1P50431 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.41□□□□□ -1.38
Shmt1P50431 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Shmt1P50431 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Shmt1P50431 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.41□□□□□ -1.38
Shmt1P50431 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Shmt1P50431 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Shmt1P50431 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Shmt1P50431 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Shmt1P50431 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.4□□□□□ -1.38
Shmt1P50431 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Mir449c-201ENSMUST00000102192 109 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Gm22372-201ENSMUST00000104589 136 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm14906-201ENSMUST00000119265 390 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Gm14695-201ENSMUST00000121721 282 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.4□□□□□ -1.38
Shmt1P50431 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm23050-201ENSMUST00000158775 165 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Gm9671-201ENSMUST00000171502 547 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm26057-201ENSMUST00000178099 165 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Shmt1P50431 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Gm37989-201ENSMUST00000195202 803 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Gm37908-201ENSMUST00000195828 470 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm44181-201ENSMUST00000203106 483 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Gm44053-201ENSMUST00000203364 929 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Gm45850-201ENSMUST00000212536 338 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Gm36262-201ENSMUST00000223274 499 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 AC160962.2-201ENSMUST00000224761 632 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Shmt1P50431 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Shmt1P50431 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Shmt1P50431 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.4□□□□□ -1.38
Shmt1P50431 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Shmt1P50431 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Shmt1P50431 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Shmt1P50431 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Shmt1P50431 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Shmt1P50431 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.4□□□□□ -1.39
Shmt1P50431 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.4□□□□□ -1.39
Shmt1P50431 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
Shmt1P50431 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Shmt1P50431 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.4□□□□□ -1.39
Shmt1P50431 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.4□□□□□ -1.39
Shmt1P50431 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Shmt1P50431 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.4□□□□□ -1.39
Shmt1P50431 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Shmt1P50431 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Shmt1P50431 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.4□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms