Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC174776.2-201ENSMUST00000222561 405 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm2544-201ENSMUST00000222702 756 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 AC156803.1-201ENSMUST00000224407 820 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 AC107453.2-201ENSMUST00000227714 655 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Rfx1P48377 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm38374-201ENSMUST00000194417 2033 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm16394-201ENSMUST00000117289 675 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm5601-201ENSMUST00000118909 972 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm14335-201ENSMUST00000119165 810 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm11759-201ENSMUST00000121742 464 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm11962-201ENSMUST00000145746 255 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm16297-201ENSMUST00000161466 459 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC7.7□□□□□ -1.18
Rfx1P48377 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Ighv1-10-201ENSMUST00000194372 355 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm37883-201ENSMUST00000194970 725 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm43108-201ENSMUST00000200525 293 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm44380-201ENSMUST00000203125 293 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm7946-201ENSMUST00000203326 958 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.7□□□□□ -1.18
Rfx1P48377 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm4042-201ENSMUST00000216946 637 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.7□□□□□ -1.18
Rfx1P48377 Zfp429-203ENSMUST00000224684 524 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm24254-201ENSMUST00000083702 104 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm23846-201ENSMUST00000083835 107 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Rfx1P48377 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC7.7□□□□□ -1.18
Rfx1P48377 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm20789-201ENSMUST00000221002 4195 ntBASIC7.7□□□□□ -1.18
Rfx1P48377 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Rfx1P48377 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Rfx1P48377 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.69□□□□□ -1.18
Rfx1P48377 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Rfx1P48377 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Rfx1P48377 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms