Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Mir6412-201ENSMUST00000184477 97 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Tnfsf4P43488 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Tnfsf4P43488 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm37189-201ENSMUST00000192131 298 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm38360-201ENSMUST00000195130 454 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm43392-201ENSMUST00000196560 434 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm31861-201ENSMUST00000204563 672 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm44580-201ENSMUST00000206333 877 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm18467-201ENSMUST00000208805 434 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm18955-201ENSMUST00000223173 649 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.32□□□□□ -1.56
Tnfsf4P43488 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Tnfsf4P43488 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm23739-201ENSMUST00000102295 108 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm11341-201ENSMUST00000122316 447 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm22223-201ENSMUST00000157360 125 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm22599-201ENSMUST00000157597 132 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm9597-201ENSMUST00000171913 602 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.31□□□□□ -1.56
Tnfsf4P43488 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Tnfsf4P43488 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.3□□□□□ -1.56
Tnfsf4P43488 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Tnfsf4P43488 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm8941-201ENSMUST00000181451 899 ntBASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm27781-201ENSMUST00000185185 92 ntBASIC5.3□□□□□ -1.56
Tnfsf4P43488 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm9317-201ENSMUST00000197055 862 ntBASIC5.3□□□□□ -1.56
Tnfsf4P43488 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.3□□□□□ -1.56
Tnfsf4P43488 Gm44214-201ENSMUST00000204153 606 ntBASIC5.3□□□□□ -1.56
Tnfsf4P43488 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.3□□□□□ -1.56
Tnfsf4P43488 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms