Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HttP42859 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.71□□□□□ -1.5
HttP42859 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HttP42859 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.71□□□□□ -1.5
HttP42859 Gm44441-201ENSMUST00000203642 2475 ntBASIC5.71□□□□□ -1.5
HttP42859 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HttP42859 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.71□□□□□ -1.5
HttP42859 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.71□□□□□ -1.5
HttP42859 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HttP42859 Gm11914-201ENSMUST00000117094 507 ntBASIC5.71□□□□□ -1.5
HttP42859 Gm15799-201ENSMUST00000120899 289 ntBASIC5.71□□□□□ -1.5
HttP42859 Gm14122-201ENSMUST00000122076 973 ntBASIC5.71□□□□□ -1.5
HttP42859 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.71□□□□□ -1.5
HttP42859 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.71□□□□□ -1.5
HttP42859 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HttP42859 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HttP42859 Gm44138-201ENSMUST00000204939 271 ntBASIC5.71□□□□□ -1.5
HttP42859 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.71□□□□□ -1.5
HttP42859 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HttP42859 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HttP42859 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HttP42859 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HttP42859 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.71□□□□□ -1.5
HttP42859 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.71□□□□□ -1.5
HttP42859 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
HttP42859 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HttP42859 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HttP42859 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HttP42859 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HttP42859 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.7□□□□□ -1.5
HttP42859 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.7□□□□□ -1.5
HttP42859 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HttP42859 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Gm14564-201ENSMUST00000122159 294 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm23954-201ENSMUST00000157213 353 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm29036-201ENSMUST00000189967 877 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.7□□□□□ -1.5
HttP42859 Mecom-201ENSMUST00000061088 348 ntBASIC5.7□□□□□ -1.5
HttP42859 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HttP42859 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.7□□□□□ -1.5
HttP42859 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HttP42859 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.7□□□□□ -1.5
HttP42859 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HttP42859 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.7□□□□□ -1.5
HttP42859 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Gm15400-201ENSMUST00000118944 601 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm11925-201ENSMUST00000121375 535 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Gm3091-201ENSMUST00000163408 484 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm19131-201ENSMUST00000203408 789 ntBASIC5.7□□□□□ -1.5
HttP42859 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.7□□□□□ -1.5
HttP42859 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HttP42859 Mir7685-201ENSMUST00000183555 62 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm27148-201ENSMUST00000185086 160 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm28304-201ENSMUST00000185977 312 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm29256-201ENSMUST00000189094 312 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm28484-201ENSMUST00000190606 312 ntBASIC5.7□□□□□ -1.5
HttP42859 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.7□□□□□ -1.5
HttP42859 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HttP42859 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HttP42859 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.69□□□□□ -1.5
HttP42859 Gm24961-201ENSMUST00000157918 184 ntBASIC5.69□□□□□ -1.5
HttP42859 Gm32453-201ENSMUST00000204183 456 ntBASIC5.69□□□□□ -1.5
HttP42859 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.69□□□□□ -1.5
HttP42859 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HttP42859 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms