Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.8□□□□□ -1.48
Lire1P11260 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm3351-201ENSMUST00000193454 505 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm2147-201ENSMUST00000193588 639 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm43233-201ENSMUST00000200491 616 ntBASIC5.8□□□□□ -1.48
Lire1P11260 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm44163-201ENSMUST00000205140 475 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm45196-201ENSMUST00000206751 825 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm6070-201ENSMUST00000207275 419 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm32983-201ENSMUST00000208500 505 ntBASIC5.8□□□□□ -1.48
Lire1P11260 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.8□□□□□ -1.48
Lire1P11260 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Lire1P11260 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Lire1P11260 Gm22126-201ENSMUST00000083244 142 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Lire1P11260 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lire1P11260 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
Lire1P11260 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
Lire1P11260 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Lire1P11260 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lire1P11260 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Lire1P11260 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Lire1P11260 Gm26079-201ENSMUST00000104066 133 ntBASIC5.79□□□□□ -1.48
Lire1P11260 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm12641-201ENSMUST00000117874 985 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.79□□□□□ -1.48
Lire1P11260 H3f3c-201ENSMUST00000119459 411 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm12379-201ENSMUST00000119607 391 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm11510-201ENSMUST00000120278 347 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm15267-201ENSMUST00000120888 464 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm26023-201ENSMUST00000122722 313 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC5.79□□□□□ -1.48
Lire1P11260 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.79□□□□□ -1.48
Lire1P11260 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Lire1P11260 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lire1P11260 Mir3473a-201ENSMUST00000175011 78 ntBASIC5.79□□□□□ -1.48
Lire1P11260 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm26557-201ENSMUST00000180756 493 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Mir7235-201ENSMUST00000183796 56 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Gm28859-201ENSMUST00000186650 616 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.79□□□□□ -1.48
Lire1P11260 Gm29519-201ENSMUST00000186994 398 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm2367-201ENSMUST00000192374 472 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.79□□□□□ -1.48
Lire1P11260 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.79□□□□□ -1.48
Lire1P11260 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm45734-201ENSMUST00000211916 411 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.79□□□□□ -1.48
Lire1P11260 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.79□□□□□ -1.48
Lire1P11260 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.79□□□□□ -1.48
Lire1P11260 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.79□□□□□ -1.48
Lire1P11260 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lire1P11260 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Lire1P11260 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lire1P11260 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lire1P11260 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Gm12618-201ENSMUST00000121754 483 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm3810-201ENSMUST00000122413 476 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm25843-201ENSMUST00000122582 314 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm22820-201ENSMUST00000157205 329 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm22226-201ENSMUST00000157355 109 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm22730-201ENSMUST00000158085 171 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm17091-201ENSMUST00000163248 357 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm7152-201ENSMUST00000163570 605 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lire1P11260 Gm17060-201ENSMUST00000172394 824 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms