Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm18343-201ENSMUST00000172802 604 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Mir7211-201ENSMUST00000184071 63 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm18427-201ENSMUST00000195422 515 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm20786-201ENSMUST00000212649 436 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm18329-201ENSMUST00000215832 589 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm23795-201ENSMUST00000084006 137 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm14659-201ENSMUST00000117667 843 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm22959-201ENSMUST00000122514 303 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm4322-201ENSMUST00000191094 336 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm37024-201ENSMUST00000192224 868 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm18952-201ENSMUST00000194471 846 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm8930-201ENSMUST00000201693 768 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm2926-201ENSMUST00000205625 239 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Chmp6P0C0A3 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm15233-201ENSMUST00000118747 400 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm6175-201ENSMUST00000121351 400 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm14732-201ENSMUST00000121372 545 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm21990-201ENSMUST00000124692 383 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm8032-201ENSMUST00000171009 574 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Mir3095-201ENSMUST00000175552 87 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm20614-201ENSMUST00000177106 632 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm37308-201ENSMUST00000194684 100 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm31306-201ENSMUST00000197517 508 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm45343-201ENSMUST00000210452 828 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.11□□□□□ -1.43
Chmp6P0C0A3 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp6P0C0A3 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms