Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm11855-201ENSMUST00000121562 1869 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 CT009711.1-201ENSMUST00000223992 3040 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm37483-201ENSMUST00000194382 1484 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm7129-201ENSMUST00000117402 997 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm8202-201ENSMUST00000117682 310 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm11784-201ENSMUST00000118568 474 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm15480-201ENSMUST00000120442 519 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm2768-201ENSMUST00000121062 250 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Mir1983-201ENSMUST00000157523 132 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm25692-201ENSMUST00000175444 125 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Mir3085-201ENSMUST00000175493 89 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm8192-201ENSMUST00000182196 958 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm7763-201ENSMUST00000182220 1006 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm7745-201ENSMUST00000182235 973 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm18797-201ENSMUST00000190809 1174 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm29435-201ENSMUST00000191310 689 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm38046-201ENSMUST00000192733 550 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm28724-202ENSMUST00000194218 295 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm3103-201ENSMUST00000198073 752 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Mir466e-201ENSMUST00000198862 84 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm43226-201ENSMUST00000202438 259 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm43812-202ENSMUST00000202701 581 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm32453-201ENSMUST00000204183 456 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm8077-201ENSMUST00000209221 1024 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm45725-201ENSMUST00000212962 337 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 AL669916.3-201ENSMUST00000213855 94 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 AL669916.6-201ENSMUST00000214610 94 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Hoxd3P09027 AL669916.4-201ENSMUST00000215976 94 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 AL669916.1-201ENSMUST00000217640 94 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC5.92□□□□□ -1.46
Hoxd3P09027 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.92□□□□□ -1.46
Hoxd3P09027 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm8231-201ENSMUST00000221617 783 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm32526-201ENSMUST00000221878 981 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm24037-201ENSMUST00000082871 180 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm3867-201ENSMUST00000086108 279 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm44228-201ENSMUST00000204888 2026 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Gm42595-201ENSMUST00000196771 1607 ntBASIC5.92□□□□□ -1.46
Hoxd3P09027 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC5.92□□□□□ -1.46
Hoxd3P09027 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hoxd3P09027 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Hoxd3P09027 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms