Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TnfP06804 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.97□□□□□ -1.45
TnfP06804 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TnfP06804 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
TnfP06804 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.96□□□□□ -1.45
TnfP06804 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TnfP06804 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
TnfP06804 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
TnfP06804 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
TnfP06804 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TnfP06804 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TnfP06804 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TnfP06804 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TnfP06804 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TnfP06804 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TnfP06804 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.96□□□□□ -1.46
TnfP06804 Gm25422-201ENSMUST00000104219 129 ntBASIC5.96□□□□□ -1.46
TnfP06804 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TnfP06804 Gm15490-201ENSMUST00000119894 387 ntBASIC5.96□□□□□ -1.46
TnfP06804 Gm13537-201ENSMUST00000120467 267 ntBASIC5.96□□□□□ -1.46
TnfP06804 Gm25291-201ENSMUST00000122795 144 ntBASIC5.96□□□□□ -1.46
TnfP06804 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.96□□□□□ -1.46
TnfP06804 Gm23233-201ENSMUST00000157301 137 ntBASIC5.96□□□□□ -1.46
TnfP06804 Gm25906-201ENSMUST00000158489 126 ntBASIC5.96□□□□□ -1.46
TnfP06804 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TnfP06804 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TnfP06804 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TnfP06804 Mir3110-201ENSMUST00000175053 80 ntBASIC5.96□□□□□ -1.46
TnfP06804 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TnfP06804 Mir7687-201ENSMUST00000184722 59 ntBASIC5.96□□□□□ -1.46
TnfP06804 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.96□□□□□ -1.46
TnfP06804 Gm6543-201ENSMUST00000197353 808 ntBASIC5.96□□□□□ -1.46
TnfP06804 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.96□□□□□ -1.46
TnfP06804 Gm44795-201ENSMUST00000205496 319 ntBASIC5.96□□□□□ -1.46
TnfP06804 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.96□□□□□ -1.46
TnfP06804 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
TnfP06804 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.96□□□□□ -1.46
TnfP06804 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.96□□□□□ -1.46
TnfP06804 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TnfP06804 Gm24525-201ENSMUST00000082917 151 ntBASIC5.96□□□□□ -1.46
TnfP06804 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TnfP06804 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TnfP06804 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TnfP06804 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TnfP06804 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
TnfP06804 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.96□□□□□ -1.46
TnfP06804 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TnfP06804 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TnfP06804 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TnfP06804 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.96□□□□□ -1.46
TnfP06804 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TnfP06804 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TnfP06804 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TnfP06804 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.95□□□□□ -1.46
TnfP06804 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
TnfP06804 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TnfP06804 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
TnfP06804 Gm23750-201ENSMUST00000104222 132 ntBASIC5.95□□□□□ -1.46
TnfP06804 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.95□□□□□ -1.46
TnfP06804 Gm15531-201ENSMUST00000118062 252 ntBASIC5.95□□□□□ -1.46
TnfP06804 Gm14267-201ENSMUST00000119751 496 ntBASIC5.95□□□□□ -1.46
TnfP06804 Gm12074-201ENSMUST00000120189 219 ntBASIC5.95□□□□□ -1.46
TnfP06804 Gm14620-201ENSMUST00000120656 383 ntBASIC5.95□□□□□ -1.46
TnfP06804 Gm26170-201ENSMUST00000158419 148 ntBASIC5.95□□□□□ -1.46
TnfP06804 Gm27754-201ENSMUST00000183340 126 ntBASIC5.95□□□□□ -1.46
TnfP06804 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
TnfP06804 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.95□□□□□ -1.46
TnfP06804 Gm42776-201ENSMUST00000198031 406 ntBASIC5.95□□□□□ -1.46
TnfP06804 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.95□□□□□ -1.46
TnfP06804 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TnfP06804 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.95□□□□□ -1.46
TnfP06804 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.95□□□□□ -1.46
TnfP06804 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TnfP06804 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TnfP06804 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.95□□□□□ -1.46
TnfP06804 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TnfP06804 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.94□□□□□ -1.46
TnfP06804 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TnfP06804 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.94□□□□□ -1.46
TnfP06804 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TnfP06804 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TnfP06804 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TnfP06804 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TnfP06804 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TnfP06804 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TnfP06804 Gm6134-201ENSMUST00000117265 171 ntBASIC5.94□□□□□ -1.46
TnfP06804 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.94□□□□□ -1.46
TnfP06804 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms