Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Hmgb3O54879 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm26106-201ENSMUST00000157254 228 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Mir6992-201ENSMUST00000183342 109 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Mir7115-201ENSMUST00000184275 64 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm29201-201ENSMUST00000189120 431 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm37682-201ENSMUST00000191776 522 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Ighv5-3-201ENSMUST00000195336 322 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm43222-201ENSMUST00000199013 603 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm19196-201ENSMUST00000209258 357 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.51□□□□□ -1.69
Hmgb3O54879 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC4.51□□□□□ -1.69
Hmgb3O54879 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 AC124732.4-201ENSMUST00000220930 1274 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 AC161252.1-201ENSMUST00000225536 467 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 AC154757.2-201ENSMUST00000228885 743 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm7887-201ENSMUST00000056948 537 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm26442-201ENSMUST00000082588 153 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm6419-201ENSMUST00000097166 429 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm9408-201ENSMUST00000197375 1505 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm8822-201ENSMUST00000118948 2347 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm14769-201ENSMUST00000118590 432 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm13506-201ENSMUST00000120391 1083 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm12369-201ENSMUST00000121343 942 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm15877-201ENSMUST00000121897 964 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm15237-201ENSMUST00000122104 469 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm14970-201ENSMUST00000122289 355 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm6872-201ENSMUST00000165001 700 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm17223-201ENSMUST00000171413 481 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC4.5□□□□□ -1.69
Hmgb3O54879 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.5□□□□□ -1.69
Hmgb3O54879 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm37700-201ENSMUST00000192617 965 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm38122-201ENSMUST00000192679 885 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Trav3n-2-201ENSMUST00000197693 334 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Trav3d-2-201ENSMUST00000199874 334 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm9278-201ENSMUST00000205508 553 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm7990-201ENSMUST00000212126 593 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC4.5□□□□□ -1.69
Hmgb3O54879 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC4.5□□□□□ -1.69
Hmgb3O54879 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC4.5□□□□□ -1.69
Hmgb3O54879 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 AC124601.1-201ENSMUST00000220531 135 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 AC124489.3-201ENSMUST00000224037 278 ntBASIC4.5□□□□□ -1.69
Hmgb3O54879 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hmgb3O54879 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms