Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Col4a6B1AVK5 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Gm24160-201ENSMUST00000104594 126 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Gm7973-201ENSMUST00000122107 488 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Gm23700-201ENSMUST00000158842 102 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Gm22411-201ENSMUST00000175462 126 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Gm22002-201ENSMUST00000175622 125 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Gm27148-201ENSMUST00000185086 160 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.82□□□□□ -1.48
Col4a6B1AVK5 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.82□□□□□ -1.48
Col4a6B1AVK5 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col4a6B1AVK5 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm23839-201ENSMUST00000116957 109 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm23883-201ENSMUST00000122686 290 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm27193-201ENSMUST00000184217 586 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm29474-201ENSMUST00000187688 379 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm42720-201ENSMUST00000196813 300 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm44673-201ENSMUST00000205692 996 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm6104-201ENSMUST00000078030 603 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col4a6B1AVK5 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm26376-201ENSMUST00000104784 110 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm16128-201ENSMUST00000117855 626 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm12641-201ENSMUST00000117874 985 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm15171-201ENSMUST00000122191 334 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm25291-201ENSMUST00000122795 144 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm23327-201ENSMUST00000157420 78 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm25865-201ENSMUST00000158247 104 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm38040-201ENSMUST00000193505 225 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm43524-201ENSMUST00000197278 298 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm9038-201ENSMUST00000203400 604 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm6362-201ENSMUST00000217686 836 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms