Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm23502-201ENSMUST00000083902 145 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm12901-201ENSMUST00000118690 532 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm27024-201ENSMUST00000182561 755 ntBASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdc40Q9DC48 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms