Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm8812-201ENSMUST00000118496 412 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm13940-201ENSMUST00000121023 301 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm14600-201ENSMUST00000121032 630 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm24628-201ENSMUST00000122761 289 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm23591-201ENSMUST00000157663 286 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm26408-201ENSMUST00000157672 127 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm18560-201ENSMUST00000173463 1123 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm9399-201ENSMUST00000175771 639 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm6061-201ENSMUST00000175860 492 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Mir8099-1-201ENSMUST00000184238 127 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm28739-201ENSMUST00000185415 696 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm29550-201ENSMUST00000185543 285 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm29259-201ENSMUST00000186396 694 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm28149-201ENSMUST00000187102 378 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm28949-201ENSMUST00000187805 696 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm28768-201ENSMUST00000189034 378 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm28483-201ENSMUST00000189519 696 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm29490-201ENSMUST00000190923 342 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm32347-201ENSMUST00000192944 696 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm19089-201ENSMUST00000197207 613 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm7463-201ENSMUST00000201541 547 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm42959-201ENSMUST00000202184 212 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 AC073947.3-201ENSMUST00000215576 766 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 CT009713.9-201ENSMUST00000223604 389 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 CT573085.1-201ENSMUST00000224279 1197 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 AC154806.1-202ENSMUST00000227949 885 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm25410-201ENSMUST00000083758 137 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim42Q9D2H5 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm25111-201ENSMUST00000116686 147 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm15203-201ENSMUST00000117668 455 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm14032-201ENSMUST00000117686 1026 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm13785-201ENSMUST00000119099 690 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm15596-201ENSMUST00000121139 784 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm22687-201ENSMUST00000158301 105 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm22434-201ENSMUST00000158549 122 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Mir6341-201ENSMUST00000183490 121 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Trbv22-201ENSMUST00000191697 291 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm37353-201ENSMUST00000194497 313 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm42431-201ENSMUST00000196880 323 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm42652-201ENSMUST00000199073 614 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Gm43345-201ENSMUST00000199484 269 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC6.95□□□□□ -1.3
Trim42Q9D2H5 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms