Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ddx56Q9D0R4 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ddx56Q9D0R4 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ddx56Q9D0R4 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.53□□□□□ -1.36
Ddx56Q9D0R4 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ddx56Q9D0R4 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ddx56Q9D0R4 Gm43843-201ENSMUST00000202396 1587 ntBASIC6.52□□□□□ -1.36
Ddx56Q9D0R4 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm11781-201ENSMUST00000118328 472 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm14531-201ENSMUST00000120845 285 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm14800-201ENSMUST00000122084 1272 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm13214-201ENSMUST00000122137 408 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm14747-201ENSMUST00000149888 984 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm23553-201ENSMUST00000157817 295 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm22519-201ENSMUST00000158270 178 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm20549-201ENSMUST00000174804 429 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm26557-201ENSMUST00000180756 493 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm37135-201ENSMUST00000192652 534 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm17934-201ENSMUST00000192818 422 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Mir703-201ENSMUST00000197105 109 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm43849-201ENSMUST00000201086 215 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm5306-201ENSMUST00000203325 757 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm6070-201ENSMUST00000207275 419 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm18487-201ENSMUST00000215826 878 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 AC151843.1-201ENSMUST00000215960 691 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm4263-202ENSMUST00000221392 667 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm5321-201ENSMUST00000072050 447 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm24144-201ENSMUST00000082632 111 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.52□□□□□ -1.37
Ddx56Q9D0R4 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm6977-201ENSMUST00000121568 512 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm12591-201ENSMUST00000122407 1177 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Mir1960-201ENSMUST00000157488 78 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm24682-201ENSMUST00000158764 137 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm17194-201ENSMUST00000164610 348 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm25120-201ENSMUST00000180148 79 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm29663-201ENSMUST00000186962 853 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm37193-201ENSMUST00000193087 513 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm9373-201ENSMUST00000208724 599 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms