Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Gm27468-201ENSMUST00000183577 106 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Gm17934-201ENSMUST00000192818 422 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Gm37355-201ENSMUST00000193345 606 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Gm37758-201ENSMUST00000194275 629 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Gm37838-201ENSMUST00000194464 312 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Gm46192-201ENSMUST00000217894 326 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Gm16335-201ENSMUST00000077495 309 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Olfr192-201ENSMUST00000080251 925 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Smc1aQ9CU62 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm23294-201ENSMUST00000104150 164 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm13890-201ENSMUST00000117578 390 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Mirt2-201ENSMUST00000175179 285 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Mir5125-201ENSMUST00000175240 79 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm29111-201ENSMUST00000188823 696 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm29201-201ENSMUST00000189120 431 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm28584-201ENSMUST00000191489 696 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm38138-201ENSMUST00000193274 696 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm37991-201ENSMUST00000194297 696 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm42652-201ENSMUST00000199073 614 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm5830-201ENSMUST00000049117 443 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Desi2-202ENSMUST00000069568 1193 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Smc1aQ9CU62 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms