Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm7146-201ENSMUST00000116079 739 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm14531-201ENSMUST00000120845 285 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Scarna10-201ENSMUST00000158992 325 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm8502-201ENSMUST00000185708 901 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm21147-201ENSMUST00000186046 913 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm22711-202ENSMUST00000197029 135 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm43849-201ENSMUST00000201086 215 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm44134-202ENSMUST00000204777 545 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm9278-201ENSMUST00000205508 553 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm18537-201ENSMUST00000205709 989 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm18329-201ENSMUST00000215832 589 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Desi2-202ENSMUST00000069568 1193 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm23927-201ENSMUST00000082466 215 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.35□□□□□ -1.55
Use1Q9CQ56 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm14930-201ENSMUST00000118864 652 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm14732-201ENSMUST00000121372 545 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm7931-201ENSMUST00000121537 271 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm12732-201ENSMUST00000121688 180 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm26069-201ENSMUST00000157497 277 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm23050-201ENSMUST00000158775 165 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm25065-201ENSMUST00000177914 132 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm26057-201ENSMUST00000178099 165 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm6223-201ENSMUST00000178436 871 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm25891-201ENSMUST00000180050 132 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm21542-201ENSMUST00000182307 993 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm37719-201ENSMUST00000194615 292 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm42961-201ENSMUST00000202023 181 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm44538-201ENSMUST00000205615 348 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm7990-201ENSMUST00000212126 593 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm23737-201ENSMUST00000082547 159 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm22351-201ENSMUST00000083925 107 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms