Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC158392.2-201ENSMUST00000225402 969 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 AC122035.2-201ENSMUST00000228698 462 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm13854-201ENSMUST00000121183 1679 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm15007-201ENSMUST00000119982 710 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm6142-201ENSMUST00000120290 325 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm11910-201ENSMUST00000121624 432 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm22820-201ENSMUST00000157205 329 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm7152-201ENSMUST00000163570 605 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm18350-201ENSMUST00000187395 955 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Mrgpra14-201ENSMUST00000189782 913 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm28620-201ENSMUST00000190463 439 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm18971-201ENSMUST00000197240 374 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm18838-201ENSMUST00000204855 886 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm19092-201ENSMUST00000209036 969 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm9652-201ENSMUST00000209345 163 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 AC159472.1-201ENSMUST00000218178 463 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 AC122034.1-201ENSMUST00000227641 595 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 AC133283.1-201ENSMUST00000228443 859 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm37023-201ENSMUST00000192895 2426 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 AC190403.1-201ENSMUST00000224515 1325 ntBASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim11Q99PQ2 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Mir546-201ENSMUST00000102105 121 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm15010-201ENSMUST00000117153 407 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm14985-201ENSMUST00000118693 786 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm14712-201ENSMUST00000120195 772 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm13574-201ENSMUST00000120482 394 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm13877-201ENSMUST00000120614 417 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm23082-201ENSMUST00000157852 133 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Mir6348-201ENSMUST00000183804 120 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Mir8105-201ENSMUST00000184718 89 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 Gm28802-201ENSMUST00000188624 944 ntBASIC7.49□□□□□ -1.21
Trim11Q99PQ2 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms