Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RtcbQ99LF4 AC166358.5-201ENSMUST00000220706 1302 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm23910-201ENSMUST00000104597 132 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm14879-201ENSMUST00000117308 507 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm16383-201ENSMUST00000118122 232 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm22529-201ENSMUST00000158817 123 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm19840-201ENSMUST00000169624 882 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm23145-201ENSMUST00000178912 79 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm8524-201ENSMUST00000186232 379 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm28883-201ENSMUST00000189256 369 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 AC192333.6-201ENSMUST00000224565 725 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RtcbQ99LF4 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.89□□□□□ -1.15
RtcbQ99LF4 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RtcbQ99LF4 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm15443-201ENSMUST00000118947 820 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm13991-201ENSMUST00000120190 648 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm25057-201ENSMUST00000157366 88 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm16269-201ENSMUST00000160532 409 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm28211-201ENSMUST00000190920 315 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm9373-201ENSMUST00000208724 599 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm46192-201ENSMUST00000217894 326 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 AC131068.1-201ENSMUST00000226891 482 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Rybp-ps-201ENSMUST00000069489 681 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm22053-201ENSMUST00000083394 200 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.88□□□□□ -1.15
RtcbQ99LF4 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
RtcbQ99LF4 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.87□□□□□ -1.15
RtcbQ99LF4 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.87□□□□□ -1.15
RtcbQ99LF4 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.87□□□□□ -1.15
RtcbQ99LF4 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
RtcbQ99LF4 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
RtcbQ99LF4 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.87□□□□□ -1.15
RtcbQ99LF4 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
RtcbQ99LF4 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.87□□□□□ -1.15
RtcbQ99LF4 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RtcbQ99LF4 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.87□□□□□ -1.15
RtcbQ99LF4 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RtcbQ99LF4 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
RtcbQ99LF4 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
RtcbQ99LF4 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
RtcbQ99LF4 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
RtcbQ99LF4 Mir582-201ENSMUST00000103758 81 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms