Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm15560-201ENSMUST00000117107 643 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm16089-201ENSMUST00000117679 336 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm12677-201ENSMUST00000118668 426 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm14871-201ENSMUST00000119056 194 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm15044-201ENSMUST00000120703 598 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm12094-201ENSMUST00000121781 472 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm8358-201ENSMUST00000167222 555 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm26318-201ENSMUST00000176507 96 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm28507-201ENSMUST00000189737 703 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm37966-201ENSMUST00000193122 326 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm35648-201ENSMUST00000202304 475 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm44132-201ENSMUST00000205142 151 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm17766-201ENSMUST00000209223 442 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm45525-201ENSMUST00000210800 389 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cstf1Q99LC2 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cstf1Q99LC2 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cstf1Q99LC2 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
Cstf1Q99LC2 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cstf1Q99LC2 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Cstf1Q99LC2 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Mir6343-201ENSMUST00000183584 84 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm8480-201ENSMUST00000190350 698 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm2429-201ENSMUST00000194635 586 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm43744-201ENSMUST00000196387 688 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm29755-201ENSMUST00000196976 948 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm18587-201ENSMUST00000213736 841 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cstf1Q99LC2 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms