Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.17□□□□□ -1.42
CopaQ8CIE6 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CopaQ8CIE6 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CopaQ8CIE6 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CopaQ8CIE6 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CopaQ8CIE6 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CopaQ8CIE6 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.17□□□□□ -1.42
CopaQ8CIE6 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
CopaQ8CIE6 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CopaQ8CIE6 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.17□□□□□ -1.42
CopaQ8CIE6 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm23440-201ENSMUST00000104299 130 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm22952-201ENSMUST00000116720 120 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm11350-201ENSMUST00000121436 870 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm16164-201ENSMUST00000160078 468 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm6055-201ENSMUST00000180532 378 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm8641-201ENSMUST00000186995 826 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm4574-201ENSMUST00000207804 542 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm4587-201ENSMUST00000209135 637 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm9292-201ENSMUST00000222008 710 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm18940-201ENSMUST00000222518 871 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm25515-201ENSMUST00000083858 157 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Olfr467-201ENSMUST00000084756 927 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.16□□□□□ -1.42
CopaQ8CIE6 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
CopaQ8CIE6 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.15□□□□□ -1.42
CopaQ8CIE6 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.15□□□□□ -1.42
CopaQ8CIE6 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.15□□□□□ -1.42
CopaQ8CIE6 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gm25917-201ENSMUST00000104267 130 ntBASIC6.15□□□□□ -1.42
CopaQ8CIE6 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gm4234-201ENSMUST00000119747 714 ntBASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gm15103-201ENSMUST00000119893 871 ntBASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gm7931-201ENSMUST00000121537 271 ntBASIC6.15□□□□□ -1.42
CopaQ8CIE6 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CopaQ8CIE6 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms