Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm25595-201ENSMUST00000102273 97 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm22371-201ENSMUST00000104588 130 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm3931-201ENSMUST00000119038 455 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm9005-201ENSMUST00000119908 607 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm25439-201ENSMUST00000158280 131 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm18808-201ENSMUST00000173316 462 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm15257-201ENSMUST00000177680 883 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm15252-201ENSMUST00000177750 883 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm15256-201ENSMUST00000177793 883 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm22420-201ENSMUST00000178795 126 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm15260-201ENSMUST00000179402 883 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm4322-201ENSMUST00000191094 336 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm19900-201ENSMUST00000207285 576 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.79□□□□□ -1.48
Ccdc28aQ8CEI3 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm20486-201ENSMUST00000101544 128 ntBASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Mir700-201ENSMUST00000102169 79 ntBASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm13156-201ENSMUST00000118348 321 ntBASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm12307-201ENSMUST00000120581 590 ntBASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm26350-201ENSMUST00000157531 288 ntBASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm23995-201ENSMUST00000158060 129 ntBASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm22993-201ENSMUST00000175423 254 ntBASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Gm8941-201ENSMUST00000181451 899 ntBASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28aQ8CEI3 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms