Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm26442-201ENSMUST00000082588 153 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Ccdc28bQ8CEG5 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.59□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ccdc28bQ8CEG5 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.59□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Ccdc28bQ8CEG5 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Ccdc28bQ8CEG5 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Mir449c-201ENSMUST00000102192 109 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm11517-201ENSMUST00000119491 387 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm5405-201ENSMUST00000120478 609 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm12488-201ENSMUST00000122449 499 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm25843-201ENSMUST00000122582 314 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm25290-201ENSMUST00000122796 144 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm25861-201ENSMUST00000158251 109 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Mir8114-201ENSMUST00000183582 111 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm29464-201ENSMUST00000187692 513 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm20239-201ENSMUST00000196610 982 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm44382-201ENSMUST00000198683 122 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm4510-201ENSMUST00000218265 427 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 n-R5s41-201ENSMUST00000083025 119 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.58□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm25345-201ENSMUST00000104505 133 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm12077-201ENSMUST00000117049 364 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm15185-201ENSMUST00000117397 746 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm14116-201ENSMUST00000117733 805 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Ighv1-17-201ENSMUST00000194435 350 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm44147-201ENSMUST00000204658 94 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm9278-201ENSMUST00000205508 553 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 AC131710.2-201ENSMUST00000226773 683 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 AC131033.1-201ENSMUST00000228223 279 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms